BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038D11LP1|AL430540
(958 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1706 1888 0.0
>3x_Contig1706
Length = 16303
Score = 1888 bits (952), Expect = 0.0
Identities = 956/958 (99%)
Strand = Plus / Minus
Query: 1 gatctctttgaacctaagggagacgaatatgtctcttatactgaattcatgagagatatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6330 gatctctttgaacctaagggagacgaatatgtctcttatactgaattcatgagagatatc 6271
Query: 61 atagcggcattatcggtaaaagattgcaatacagcgttcgaaatcagacaatatgtttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6270 atagcggcattatcggtaaaagattgcaatacagcgttcgaaatcagacaatatgtttgg 6211
Query: 121 tttttcaaccgaattagacaaaggacagtcatggctcgtgcgttactgcaatcatattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6210 tttttcaaccgaattagacaaaggacagtcatggctcgtgcgttactgcaatcatattta 6151
Query: 181 attagagaagacaccatcttagacaagtttcggtttaacacgttcaaggatatgcacctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6150 attagagaagacaccatcttagacaagtttcggtttaacacgttcaaggatatgcacctt 6091
Query: 241 tacgagttctcattagcaggaacagcattgtacgatgtaatatccagccgcgagcmaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 6090 tacgagttctcattagcaggaacagcattgtacgatgtaatatccagccgcgagcaaaca 6031
Query: 301 acagatcgcgataatatgatagaagccttgaatgaactctcatattgcctccttcgttgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6030 acagatcgcgataatatgatagaagccttgaatgaactctcatattgcctccttcgttgg 5971
Query: 361 tatcaaaatatgccacaaaattcatgtaggcatcggcaaggatttaatagactattactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5970 tatcaaaatatgccacaaaattcatgtaggcatcggcaaggatttaatagactattactc 5911
Query: 421 gactgggactccgttcaagcgcaatttgagcaatatgaaacccaatggcaatcaatggga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5910 gactgggactccgttcaagcgcaatttgagcaatatgaaacccaatggcaatcaatggga 5851
Query: 481 attgtagatagcattacaaacatggggaatatcccattgatgccagtttcaacatggatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5850 attgtagatagcattacaaacatggggaatatcccattgatgccagtttcaacatggatt 5791
Query: 541 tacactacaaagttgcttatgatgatagaattcactttagaaggatttcatttggaagtt 600
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5790 tacactacaaagttgcttatgatgatagaagtcactttagaaggatttcatttggaagtt 5731
Query: 601 tacaagccttgggaatcctttactcagtactggttctgttattacttgtcgagtcacttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5730 tacaagccttgggaatcctttactcagtactggttctgttattacttgtcgagtcacttg 5671
Query: 661 gaatcaaacttgaaaagattgcacgagtttctgttgcagaagatcagttacattttgaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5670 gaatcaaacttgaaaagattgcacgagtttctgttgcagaagatcagttacattttgaat 5611
Query: 721 tacaataagagaataaagaaactcaaggccggcgaaaagaaagagaatgctaaagcgcgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5610 tacaataagagaataaagaaactcaaggccggcgaaaagaaagagaatgctaaagcgcgc 5551
Query: 781 tatagacatttaacagataatgttttacctcaactaagactaaacgagagaactgtcaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5550 tatagacatttaacagataatgttttacctcaactaagactaaacgagagaactgtcaat 5491
Query: 841 ttctttttcatgaaatgcacaatatttaagtctctctccctggctcaagtattccaattt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5490 ttctttttcatgaaatgcacaatatttaagtctctctccctggctcaagtattccaattt 5431
Query: 901 gcactacttaaatctttcaacgtaatagattctaagaatgatgtgtctacccgattca 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5430 gcactacttaaatctttcaacgtaatagattctaagaatgatgtgtctacccgattca 5373
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7245
Number of Sequences: 1807
Number of extensions: 7245
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 958
length of database: 10,358,551
effective HSP length: 16
effective length of query: 942
effective length of database: 10,329,639
effective search space: 9730519938
effective search space used: 9730519938
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)